Home Contractor accountants Ltd accounting checklist

· About 2,100 words · Part of the contractor accountant cluster.

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Running a UK Ltd contractor company means hitting a recurring set of statutory, tax and operational obligations. This checklist walks the full annual cycle — what to do weekly, monthly, quarterly and annually — so nothing falls through. Whether you have an accountant or DIY, knowing the full picture matters; you're the company director and the legal accountability sits with you.

Weekly tasks

The day-to-day rhythm of bookkeeping. Set aside 30–60 minutes once a week.

  1. Reconcile bank transactions — match incoming bank feed transactions against invoices, expenses and other categories in your accounting software
  2. Capture receipts — photograph or upload any business expense receipts. Categorise (travel, software, training, etc.)
  3. Send any due invoices — review your pipeline; send invoices for completed work as soon as agreed terms allow
  4. Chase any overdue invoices — see our chasing unpaid invoices guide
  5. Move money to tax / VAT pots — many contractors hold separate sub-accounts for accumulated CT, VAT and dividend tax. Top them up weekly so you're not surprised at quarter end
  6. Review cash position — sense-check your runway. Particularly important for variable-revenue contractors

Weekly is the right cadence for these — leaving them monthly creates a stale-data backlog that becomes harder to reconstruct.

Monthly tasks

The monthly rhythm — typically completed in the first week after month-end.

  1. Run monthly payroll — process director salary (and any other employees). RTI submission to HMRC on or before pay date
  2. Pay PAYE / NIC to HMRC — due by 22nd of the following month (electronic). For sole-director Ltds with salary set at the NI threshold, often £0 — but RTI is still required
  3. Declare any dividends — if drawing dividends, prepare the dividend voucher and board minute. Record in the company books. Move the cash from business to personal account
  4. Pay regular subscriptions — software, insurance, professional memberships. Categorise in books as you go
  5. Update tax pots — recalculate CT and VAT accrual based on the month's activity
  6. Review month-end position — quick profit/loss check; runway; any concerning trends
  7. Check upcoming deadlines — anything due in the next 30–45 days that needs prep work

The monthly close is where small errors get caught early. Skipping a few months turns a 1-hour review into a 5-hour catch-up.

Quarterly tasks

The VAT-driven cycle for most VAT-registered contractors.

  1. Prepare VAT return — review the quarter's transactions, ensure all are correctly categorised (standard-rated, zero-rated, reverse-charge, exempt), check input VAT claims
  2. Submit VAT return via MTD-compliant software — FreeAgent, Xero, QuickBooks all submit directly to HMRC. Due 1 calendar month + 7 days after the quarter end
  3. Pay VAT to HMRC — same deadline. Direct debit is the cleanest method; some contractors prefer manual to retain control
  4. Management accounts review — short summary of the quarter's revenue, costs, profit and tax position. Useful for sanity checks and tax planning conversations
  5. Review dividend strategy — has the quarter's profit changed your year-end dividend plan? Particularly relevant near the higher-rate dividend threshold
  6. Update tax forecasts — Corporation Tax accrual and personal Self Assessment estimates based on YTD numbers

For reverse-charge VAT (B2B services to / from overseas), see our reverse-charge VAT guide. For international VAT specifically, see VAT on international services.

Annual tasks

The big once-a-year compliance load. Spread across a few months depending on your year-end date.

1. Year-end accounts preparation

2. Companies House filings (due 9 months after year-end)

3. Corporation Tax (payment due 9 months + 1 day after year-end; return due 12 months)

4. Confirmation statement (due within 14 days of anniversary of incorporation)

5. Director Self Assessment (deadline 31 January following the tax year)

6. P11D (if applicable, due 6 July following the tax year)

7. Annual tax planning review

For a personalised view of deadlines based on your year-end date, see our contractor tax deadlines calendar.

One-off / event-driven tasks

Beyond the routine, certain events trigger their own accounting tasks:

New contract or engagement

VAT threshold crossings

Hiring someone

Major asset purchase

Change of accounting reference date

Closing the company

Suggested calendar pattern

A workable pattern for a contractor running their own Ltd:

Every Friday afternoon

30–60 min: bank reconciliation, expense capture, invoice sending, chasing, tax pot top-ups.

First Monday of every month

1–2 hours: monthly payroll, dividend voucher (if applicable), monthly close, deadline review.

End of each VAT quarter

2–4 hours: VAT return prep + submission, quarterly management accounts review.

Two months before year-end

Plan ahead: meet with accountant (if you have one); decide on year-end dividend strategy; review pension contributions; capture any planned expenses before close.

Year-end + 1 to year-end + 4 months

Year-end accounts and CT600 preparation. Tasks complete by month 9 after year-end (payment deadline) and month 12 (filing deadline).

January

Self Assessment filing for the previous tax year. Balancing payment + first POA. Set up next year's tax pot.

July

Self Assessment second payment on account.

Add reminders in your calendar at least 2 weeks before each deadline, not on the deadline itself. The deadline is the latest point; payments and filings benefit from a few working days of buffer.

Tools that help

The recurring tools that make this checklist manageable:

For a deeper take on which accounting platform fits your situation, see FreeAgent for contractors and accounting software for Ltd companies.

Common filing mistakes to avoid

The categories of mistakes that catch UK Ltd contractors most often:

Confusing accounts and confirmation statement

These are two separate filings on two separate dates. Many first-year directors think they've "filed everything" when they file accounts, then miss the confirmation statement. Each has its own penalty for lateness.

Paying Corporation Tax late (or estimating wrong)

The payment is due 9 months and 1 day after year-end — before the CT600 return is due. If you don't have a final number, pay an estimate by the deadline and adjust later. Late payment triggers interest from day one.

Declaring dividends without sufficient reserves

Dividends can only be paid from distributable reserves (essentially accumulated post-tax profits). Declaring more than available creates an unlawful dividend that HMRC can recharacterise as a director loan, attracting s455 tax. Always check reserves before declaring.

Missing dividend voucher / board minute

Each dividend should be supported by a voucher and a board minute approving the declaration. Without these, HMRC can challenge the declaration as not properly executed.

Mis-categorising VAT

Standard-rated vs zero-rated vs exempt vs reverse-charge — each is treated differently on the VAT return. Mistakes here can lead to under- or over-claimed input VAT, both of which HMRC will eventually catch.

Forgetting employee benefits (P11D)

Even small benefits in kind (subsidised travel, gym membership through the company, etc.) trigger P11D filings. Many contractors with no formal benefits assume P11D doesn't apply; usually correct, but worth confirming.

Treating personal expenses as business

The wholly-and-exclusively test for business expenses is stricter than many contractors realise. Putting personal subscriptions, family meals, or holiday travel through the company creates trouble at HMRC enquiry stage.

Missing the IR35 reassessment trigger

If your working practices change mid-engagement (more direction from the client, less substitution rights, more integration into client team), your IR35 status may need reassessing. Continuing to treat as outside when it's now inside creates back-tax exposure.

Closing the company informally

Companies don't "just close" — there's a formal process (DS01 strike-off or MVL liquidation). Stopping trading and ignoring the company creates problems: Companies House will eventually dissolve it, but unpaid tax remains your concern.

When something goes wrong

Practical response if you miss a deadline or make an error:

The pattern across all of these: act early, communicate, don't ignore. HMRC and Companies House are far more reasonable with contractors who engage promptly than with those who go silent.

2–6 hours/month for a contractor doing full DIY — bookkeeping (weekly), monthly payroll, and quarterly VAT. Adding the year-end push, full DIY is ~110–180 hours/year. With an accountant, you spend 10–20 hours/year reviewing and providing documents.

Yes — UK Ltd companies must file annual statutory accounts with Companies House and Corporation Tax returns with HMRC, regardless of profit or activity. Even dormant companies have minimal filings.

Different filings. Accounts report your year's financial position (due 9 months after year-end). Confirmation statement confirms company structure and details (due 14 days after anniversary of incorporation). Both are required annually.

HMRC charges late-payment interest from day one (around 7–8% currently, varying with base rate). Persistent or large lateness can escalate to enforcement action. Pay the estimate by the deadline even if the return isn't finalised; you can adjust later.

Not legally — you can DIY, particularly with FreeAgent or similar. Practically, most Ltd contractors hire one because the tax efficiency, time savings, and risk reduction earn the fee. See accountant vs DIY.

Yes — you can shorten or extend your accounting reference date at Companies House. The first extension can be up to 18 months; later changes are constrained. Knock-on effects on CT, VAT and accounts deadlines.

You can run multiple income streams through the same Ltd — each invoiced separately, all consolidated in the books. IR35 status is assessed per engagement, not per company. Multiple revenue streams are common for portfolio contractors.

HMRC requires you to keep Ltd company records for at least 6 years from the end of the relevant accounting period. Companies House requires accounts for at least 3 years. Practically, keep records for 7+ years; digital storage is fine and recommended.

Editorial guidance only — not personalised tax or filing advice. Always verify deadlines with HMRC / Companies House and consult a qualified accountant for specific situations.